|
|
 |
Cluster Configuration:
I. Hardware.
The core part of mphase cluster consists of 60 dual and single processor
Linux machines purchased from the major cluster builders in the country
(Microway and Aspen Systems)
- 44 dual CPU rack-mount AMD MP 1.6 GHz from Aspen Systems;
- 8 single CPU boxes AMD Athlon 1.2 GHz from Microway;
- 8 dual CPU boxes P-III 866 MHz from Microway.
The machines are interconnected over a 100 MBit switching private network.
II. Software.
The operating system installed is Debian Sarge 3.1.
Computational resources are managed by Sun Grid Engine (SGE) 6.0 queue system
Compilers installed:
- GNU gcc-3.3.5 C/C++ and Fortran 77 (gcc, g++ and g77)
- IA32 Intel 9.0 C++ and Fortran 90/95 (icc and ifort)
- PGI 6.0-5 C/C++, F77/F90 (pgcc, pgCC, pgf77, pgf90).
OpenMP support is included in PGI for parallelization on SMP dual-CPU nodes.
NAG Math libraries
MPI for parallel simulations, mpich-1.2.7
Matlab 7.0 R14
AeroSoft GASP 422 (can be used with authorization of Prof. D. Knight only)
NAMD 2.6b1
and VMD
AMBER 8 (can be used with authorization of Prof. N. Langrana only)
FLUENT 6.2 (can be used by Mechanical Engineering users only)
GROMACS 3.2.1
|
|
© 2003 All Rights Reserved.
Rutgers, The State University of New Jersey.
|
|
